CDS

Accession Number TCMCG056C16989
gbkey CDS
Protein Id XP_031392761.1
Location complement(join(6470021..6470070,6470279..6470362,6470476..6470580,6470691..6470814,6470897..6471014,6471331..6471461,6471584..6471644,6471777..6471870,6472303..6472387,6472495..6472605,6472860..6472905,6473340..6473400,6473802..6473898,6474162..6474221,6474416..6474490))
Gene LOC116204692
GeneID 116204692
Organism Punica granatum

Protein

Length 433aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA580467
db_source XM_031536901.1
Definition tRNA pseudouridine(38/39) synthase isoform X4 [Punica granatum]

EGGNOG-MAPPER Annotation

COG_category J
Description tRNA pseudouridine synthase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01855        [VIEW IN KEGG]
EC 5.4.99.45        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0001522        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009982        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016556        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0031119        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990481        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCAGCTTCGATCGGTTCCGATTTGATAAGAAGCCTGCAGTCGGAGATCGTCTCTCTCCACAACAGAGTCAAGGAACTGGAAGAGGAGAACGCTAAGCTCTCAACTCGACTCTCAGAATGTTGCTGTGAAAAGACGAGAAGCAATTCGAATTCTGTTGCCAATGGGGGGAATTCGGTCTATGAGAATGGAGCACAGATCAGGAAGAGTAATAAGACCAAGAAGAAGAAAGGGACCATCGAACACCTTCCCAAAAGATATGTTGCTTTGCGAGTCTTGTATTTTGGGCAGAGGTTTTATGGGTTTGCTTCTGAGGCACAATTGGATCCAACTGTTGAGTCAGAGCTTTTTAAAGCTCTTGAAAAAACGAGACTTCTAGTTGGTGACAGGAAGAAGTCACAGTACTCAAGATGTGGCAGAACAGACAAAGGAGTTTCTGCAGTTGGGCAAGTGATTGCCTTGTTTCTGAGATCAAACCTGAAGGAAACAAATGAAAATGATAATATGCCCTGTGAGTTTGGCCAGCGGCAAGATGGTGAAATTGATTATGTGAGAGTATTAAATCGAGCCTTACCAAAAGATATTCGAGTGACGGGCTGGTGTCCTGTTCCAGTTGGTTTCAGTGCCAGGTTTAGCTGCTTGAGCAGGGAGTACAAATATTTCTTTTGGAGGGATGATCTGAATATCTCGGCAATGGAGCATGCAGGAAAGAAATTTATTGGGGAGCATGACTTCAGAAACTTTTGCAAGATGGATGCAGCAAATGTTCACCATTACAGGCGTCATATTTCATCGTTTGAGCTTATACCTTGCAATAAGAGCTTCGATGGAAATCAGCTCTGGGTAATTAAAGTTACTGGTAGTGCGTTCCTGTGGCACCAAGTCCGCTGCATGGTTGCTGTGCTCTTTATGGTTGGTCAAGGCCTTGAATCCCCACAGATATTAGAATTCTTACTCGACACTGACAGAACACAGAGAAAACCACAGTATGCCATGGCCTCAGAGATTCCTTTAGTTCTGCAATCTTGTCAATTCGAAGGCCTCACATTTACCTGTTCTTCAGATGCTTTTCAAGCATTGCGTATACACTTAGAGAATGAATGTCGAGCCTATGAACTCCAAGCAGCAATGTACCATGAGGCTCTACTTAATTTGCTTCCTGAACATGTTTTTTCAGATCGGACTTCATTGAGCAGTGGAACCAGTAAAAAGGTTGCTTCACATGTTCCTCTCATCTCACGCCCTACAGAGCCATCTTATGAAGAACGGCGCGCTAAATTGAACCCGAGACAGGAACTCTGA
Protein:  
MSASIGSDLIRSLQSEIVSLHNRVKELEEENAKLSTRLSECCCEKTRSNSNSVANGGNSVYENGAQIRKSNKTKKKKGTIEHLPKRYVALRVLYFGQRFYGFASEAQLDPTVESELFKALEKTRLLVGDRKKSQYSRCGRTDKGVSAVGQVIALFLRSNLKETNENDNMPCEFGQRQDGEIDYVRVLNRALPKDIRVTGWCPVPVGFSARFSCLSREYKYFFWRDDLNISAMEHAGKKFIGEHDFRNFCKMDAANVHHYRRHISSFELIPCNKSFDGNQLWVIKVTGSAFLWHQVRCMVAVLFMVGQGLESPQILEFLLDTDRTQRKPQYAMASEIPLVLQSCQFEGLTFTCSSDAFQALRIHLENECRAYELQAAMYHEALLNLLPEHVFSDRTSLSSGTSKKVASHVPLISRPTEPSYEERRAKLNPRQEL